Healthy Greek Yogurt Pumpkin Muffins Recipe
Introduction
These Healthy Greek Yogurt Pumpkin Muffins are moist, flavorful, and perfect for a nutritious breakfast or snack. Made with whole wheat flour and naturally sweetened with honey, they offer a delicious way to enjoy autumn flavors any time of year.

Ingredients
- 1 cup pumpkin puree
- 1/2 cup Greek yogurt
- 1/4 cup honey
- 2 eggs
- 1 tsp vanilla extract
- 1 1/2 cups whole wheat flour
- 1 tsp baking soda
- 1/2 tsp baking powder
- 1 tsp cinnamon
- 1/2 tsp nutmeg
- 1/4 tsp salt
Instructions
- Step 1: Preheat your oven to 350°F (175°C) and line a muffin tin with paper liners or grease it lightly.
- Step 2: In a large bowl, whisk together the pumpkin puree, Greek yogurt, honey, eggs, and vanilla extract until smooth and well combined.
- Step 3: In a separate bowl, sift together the whole wheat flour, baking soda, baking powder, cinnamon, nutmeg, and salt.
- Step 4: Gradually add the dry ingredients to the wet ingredients, stirring gently until just combined. Avoid overmixing to keep the muffins tender.
- Step 5: Divide the batter evenly among the prepared muffin cups, filling each about two-thirds full.
- Step 6: Bake for 18-22 minutes or until a toothpick inserted into the center comes out clean.
- Step 7: Allow the muffins to cool in the tin for 5 minutes before transferring them to a wire rack to cool completely.
Tips & Variations
- For extra moisture and texture, fold in 1/4 cup chopped nuts or dark chocolate chips before baking.
- Use canned pumpkin puree if fresh pumpkin isn’t available; just make sure it’s plain and unsweetened.
- Swap honey for maple syrup or agave nectar for a different natural sweetness.
- If you prefer a spicier flavor, increase the cinnamon and nutmeg slightly or add a pinch of ground cloves.
Storage
Store the muffins in an airtight container at room temperature for up to 3 days. For longer storage, refrigerate them for up to a week or freeze for up to 3 months. To reheat, warm in the microwave for 15-20 seconds or until heated through.
How to Serve

Serve this delicious recipe with your favorite sides.
FAQs
Can I use regular yogurt instead of Greek yogurt?
Yes, you can substitute regular yogurt, but Greek yogurt gives the muffins a thicker texture and added protein, making them denser and more moist.
Are these muffins suitable for gluten-free diets?
This recipe uses whole wheat flour and is not gluten-free as written. To make it gluten-free, substitute with a gluten-free flour blend designed for baking.
PrintHealthy Greek Yogurt Pumpkin Muffins Recipe
These Healthy Greek Yogurt Pumpkin Muffins are a delicious, nutrient-packed treat perfect for autumn or any time of year. Combining the natural sweetness of pumpkin and honey with the creaminess of Greek yogurt, these muffins offer a moist texture and rich flavor. Using whole wheat flour adds fiber and wholesomeness, making them a great choice for a health-conscious snack or breakfast option.
- Prep Time: 10 minutes
- Cook Time: 20 minutes
- Total Time: 30 minutes
- Yield: 12 muffins 1x
- Category: Breakfast
- Method: Baking
- Cuisine: American
- Diet: Low Fat
Ingredients
Wet Ingredients
- 1 cup pumpkin puree
- 1/2 cup Greek yogurt
- 1/4 cup honey
- 2 eggs
- 1 tsp vanilla extract
Dry Ingredients
- 1 1/2 cups whole wheat flour
- 1 tsp baking soda
- 1/2 tsp baking powder
- 1 tsp cinnamon
- 1/2 tsp nutmeg
- 1/4 tsp salt
Instructions
- Preheat and Prepare Pan: Preheat your oven to 350°F (175°C) and line a muffin tin with paper liners or lightly grease it to prevent sticking.
- Mix Wet Ingredients: In a large bowl, whisk together the pumpkin puree, Greek yogurt, honey, eggs, and vanilla extract until the mixture is smooth and well combined.
- Combine Dry Ingredients: In a separate bowl, sift together the whole wheat flour, baking soda, baking powder, cinnamon, nutmeg, and salt to ensure even distribution of the leavening agents and spices.
- Mix Wet and Dry Ingredients: Gradually add the dry mixture to the wet ingredients, gently folding with a spatula or spoon just until combined. Be careful not to overmix, as this can make the muffins tough.
- Fill Muffin Tin: Evenly divide the batter into the prepared muffin cups, filling each about two-thirds full to allow room for rising.
- Bake: Place the muffin tin in the preheated oven and bake for 18-22 minutes, or until a toothpick inserted into the center of a muffin comes out clean.
- Cool and Serve: Remove the muffins from the oven and let them cool in the tin for about 5 minutes before transferring to a wire rack to cool completely. Serve warm or at room temperature.
Notes
- Use canned or homemade pumpkin puree; avoid pumpkin pie filling which contains added sugars and spices.
- Greek yogurt adds moisture and protein, but whole milk yogurt can be used as a substitute.
- For a vegan version, replace eggs with flax eggs and honey with maple syrup, but texture may vary.
- Store muffins in an airtight container at room temperature for up to 3 days or refrigerate for up to a week.
- Optionally add chopped nuts or dark chocolate chips for extra texture and flavor.
Keywords: healthy pumpkin muffins, greek yogurt muffins, whole wheat muffins, low fat muffins, pumpkin recipes, fall baking

